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CloneSig can jointly infer intra-tumor heterogeneity and mutational signature activity in bulk tumor sequencing data
Judith Abécassis
,
Fabien Reyal
,
Jean-Philippe Vert
Journal articles
hal-03510272v1
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Endoscopic management of 345 small rectal neuroendocrine tumours: A national study from the French group of endocrine tumours (GTE)
Caroline Fine
,
Guillaume Roquin
,
Eric Terrebonne
,
Thierry Lecomte
,
Romain Coriat
et al.
Journal articles
hal-02549178v1
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Risk-reducing salpingo-oophorectomy, natural menopause, and breast cancer risk: an international prospective cohort of BRCA1 and BRCA2 mutation carriers
Nasim Mavaddat
,
Antonis C. Antoniou
,
Thea Mooij
,
Maartje Hooning
,
Bernadette Heemskerk-Gerritsen
et al.
Journal articles
inserm-02445596v1
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Autoimmunity affecting the biliary tract fuels the immunosurveillance of cholangiocarcinoma
Juliette Paillet
,
Céleste Plantureux
,
Sarah Lévesque
,
Julie Le Naour
,
Gautier Stoll
et al.
Journal articles
hal-03378827v1
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Contribution of epigenetic landscapes and transcription factors to X-chromosome reactivation in the inner cell mass
Maud Borensztein
,
Ikuhiro Okamoto
,
Laurène Syx
,
Guillaume Guilbaud
,
Christel Picard
et al.
Journal articles
hal-03437406v1
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A new pairwise kernel for biological network inference with support vector machines.
Jean-Philippe Vert
,
Jian Qiu
,
William S Noble
Journal articles
hal-00433573v1
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Metric learning pairwise kernel for graph inference
Jean-Philippe Vert
,
Jian Qiu
,
William Noble
2006
Preprints, Working Papers, ...
hal-00108477v1
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A new hybrid record linkage process to make epidemiological databases interoperable: application to the GEMO and GENEPSO studies involving BRCA1 and BRCA2 mutation carriers
Yue Jiao
,
Fabienne Lesueur
,
Chloé-Agathe Azencott
,
Maïté Laurent
,
Noura Mebirouk
et al.
Journal articles
inserm-03313811v1
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A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport
Adham Safieddine
,
Emeline Coleno
,
Soha Salloum
,
Arthur Imbert
,
Abdel-Meneem Traboulsi
et al.
Journal articles
hal-03014936v2
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Addressing barriers in comprehensiveness, accessibility, reusability, interoperability and reproducibility of computational models in systems biology
Anna Niarakis
,
Dagmar Waltemath
,
James Glazier
,
Falk Schreiber
,
Sarah Keating
et al.
Journal articles
hal-03690604v1
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A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction.
Brice Hoffmann
,
Mikhail Zaslavskiy
,
Jean-Philippe Vert
,
Véronique Stoven
Journal articles
inserm-00663528v1
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Determining the optimal number of independent components for reproducible transcriptomic data analysis
Ulykbek Kairov
,
Laura Cantini
,
Alessandro Greco
,
Askhat Molkenov
,
Urszula Czerwinska
et al.
Journal articles
inserm-02064099v1
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Large scale evaluation of differences between network-based and pairwise sequence-alignment-based methods of dendrogram reconstruction
Daniel Gamermann
,
Arnau Montagud
,
J Alberto Conejero
,
Pedro Fernández de Córdoba
,
Javier F Urchueguía
et al.
Journal articles
inserm-02317883v1
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Validation de biomarqueurs prédictifs de la réponse au traitement : extension des courbes de prédictivités à un critère de jugement censuré
Bassirou Mboup
Theses
tel-03176621v1
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Genetic markers and phosphoprotein forms of beta-catenin pβ-Cat552 and pβ-Cat675 are prognostic biomarkers of cervical cancer
Suzy M Scholl
,
Jonas Beal
,
Leanne de Koning
,
Elodie Girard
,
Marina Popovic
et al.
Journal articles
hal-03492821v1
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Heterogeneity of neuroblastoma cell identity defined by transcriptional circuitries
Valentina Boeva
,
Caroline Louis-Brennetot
,
Agathe Peltier
,
Simon Durand
,
Cecile Pierre-Eugene
et al.
Journal articles
hal-01741718v1
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Tight convex relaxations for sparse matrix factorization
Emile Richard
,
Guillaume Obozinski
,
Jean-Philippe Vert
2014
Preprints, Working Papers, ...
hal-01025959v3
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Rôle de la phosphatase PRL-3 et de CRMP2 dans la migration et l'invasion du mélanome uvéal
Laura Duciel
Theses
tel-02304146v1
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An autocrine ActivinB mechanism drives TGF β/Activin signaling in Group 3 medulloblastoma
Morgane Morabito
,
Magalie Larcher
,
Florence M G Cavalli
,
Chloé Foray
,
Antoine Forget
et al.
Journal articles
hal-02347105v1
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A community effort to assess and improve drug sensitivity prediction algorithms
James C Costello
,
Laura M Heiser
,
Elisabeth Georgii
,
Mehmet Gönen
,
Michael P Menden
et al.
Journal articles
hal-01101874v1
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A generic methodological framework for studying single cell motility in high-throughput time-lapse data
Alice Schoenauer Sebag
,
Sandra Plancade
,
Céline Raulet-Tomkiewicz
,
Robert Barouki
,
Jean-Philippe Vert
et al.
Journal articles
hal-01246689v1
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SVDetect: a tool to identify genomic structural variations from paired-end and mate-pair sequencing data
Bruno Zeitouni
,
Valentina Boeva
,
Isabelle Janoueix-Lerosey
,
Sophie Loeillet
,
Patricia Legoix-Né
et al.
Journal articles
inserm-00508372v1
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Interest of Colchicine for the Treatment of Cystic Fibrosis Patients. Preliminary Report
I. Sermet-Gaudelus
,
Véronique Stoven
,
J. Annereau
,
V. Witko-Sarsat
,
P. Reinert
et al.
Journal articles
hal-03116923v1
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CinéBreast-factors influencing the time to first metastatic recurrence in breast cancer: Analysis of real-life data from the French ESME MBC database
P. Gougis
,
M. Carton
,
C. Tchokothe
,
M. Campone
,
F. Dalenc
et al.
Journal articles
hal-02888468v1
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BRCAness, SLFN11, and RB1 loss predict response to topoisomerase I inhibitors in triple-negative breast cancers
Florence Coussy
,
Rania El-Botty
,
Sophie Château-Joubert
,
Ahmed Dahmani
,
Elodie Montaudon
et al.
Journal articles
hal-02508765v1
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Prognosis and chemosensitivity of non-V600E BRAF mutations in metastatic colorectal carcinoma (mCRC): An AGEO French multicenter retrospective cohort.
Aline Derosiere
,
Vincent Nicolai
,
David Malka
,
Astrid Pozet
,
Julien Lazartigues
et al.
Journal articles
hal-03606012v1
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Supervised reconstruction of biological networks with local models.
Kevin Bleakley
,
Gérard Biau
,
Jean-Philippe Vert
Journal articles
hal-00433575v1
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Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
Ferhat Ay
,
Evelien M. Bunnik
,
Nelle Varoquaux
,
Sebastiaan M. Bol
,
Jacques Prudhomme
et al.
Journal articles
hal-01101873v1
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Large-scale machine learning for metagenomics sequence classification
Kevin Vervier
,
Pierre Mahé
,
Maud Tourmoud
,
Jean-Baptiste Veyrieras
,
Jean-Philippe Vert
et al.
Bioinformatics, 2016, 32 (7), pp.1023-32
Journal articles
hal-01420829v1
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Telomere length, ATM mutation status and cancer risk in Ataxia-Telangiectasia families
Anne Laure Renault
,
Noura Mebirouk
,
Eve Cavaciuti
,
Dorothée Le Gal
,
J. Lecarpentier
et al.
Journal articles
hal-01658591v1
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