Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014)
Pierre de Buyl
,
Nelle Varoquaux
2014
Books
hal-01584599v1
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A new pairwise kernel for biological network inference with support vector machines.
Jean-Philippe Vert
,
Jian Qiu
,
William S Noble
Journal articles
hal-00433573v1
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Supervised reconstruction of biological networks with local models.
Kevin Bleakley
,
Gérard Biau
,
Jean-Philippe Vert
Journal articles
hal-00433575v1
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Effect Of Reproductive Factors And Body Mass Index On The Mutation Localization-Specific Risk Of Breast Cancer In The French National BRCA1/2 Carrier Cohort (GENEPSO)
Julie Lecarpentier
,
Catherine Nogues
,
Emmanuelle Mouret-Fourme
,
Dominique Stoppa-Lyonnet
,
Christine Lasset
et al.
Annual meeting of the International Genetic Epidemiology Society , Sep 2011, Heidelberg, Germany. p. 156-157, ref 134,
⟨10.1002/gepi.21604⟩
Conference papers
istex
inserm-00690885v1
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Comparing phylogenetic and statistical classification methods for DNA barcoding
Frédéric Austerlitz
,
Olivier David
,
Brigitte Schaeffer
,
Kevin Bleakley
,
Madalina Olteanu
et al.
In Second International Barcode of Life Conference. Consortium for the Barcode of Life , Sep 2007, Taipei, Taiwan
Conference papers
hal-02757822v1
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Integrative approaches for the identification of therapeutic targets in basal-like breast cancer from multi-level molecular data
B. M. Tesson
,
Guillem Rigaill
,
D. Gentien
,
S. Roman-Roman
,
F. Cruzalegui
et al.
22. Biennial Congress of the European Association for Cancer Research , Jul 2012, Barcelone, Spain.
Elsevier Science LTD , European Journal of Cancer, 48 (Suppl. 5), 2012, European Journal of Cancer
Conference poster
hal-01189748v1
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Variation of Breast Cancer Risk in the French National BRCA1/2 Carrier Cohort (GENEPSO)
Julie Lecarpentier
,
Catherine Noguès
,
Emmanuelle Mouret-Fourme
,
Rosette Lidereau
,
Nadine Andrieu
et al.
Eighteenth annual meeting of the International Genetic Epidemiology Society , Oct 2009, Kahuku, Hawaii, United States. page 819, 229,
⟨10.1002/gepi.20463⟩
Conference papers
istex
inserm-00610028v1
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Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
Ferhat Ay
,
Evelien M. Bunnik
,
Nelle Varoquaux
,
Sebastiaan M. Bol
,
Jacques Prudhomme
et al.
Journal articles
hal-01101873v1
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A community effort to assess and improve drug sensitivity prediction algorithms
James C Costello
,
Laura M Heiser
,
Elisabeth Georgii
,
Mehmet Gönen
,
Michael P Menden
et al.
Journal articles
hal-01101874v1
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Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation.
Serena Sanulli
,
Neil Justin
,
Aurélie Teissandier
,
Katia Ancelin
,
Manuela Portoso
et al.
Journal articles
hal-01110498v1
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A generic methodological framework for studying single cell motility in high-throughput time-lapse data
Alice Schoenauer Sebag
,
Sandra Plancade
,
Céline Raulet-Tomkiewicz
,
Robert Barouki
,
Jean-Philippe Vert
et al.
Journal articles
hal-01246689v1
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Stability-based comparison of class discovery methods for DNA copy number profiles.
Isabel Brito
,
Philippe Hupé
,
Pierre Neuvial
,
Emmanuel Barillot
PLoS ONE , 2012, 8 (12), pp.e81458
Journal articles
hal-01201580v1
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Classification of microarray data using gene networks.
Franck Rapaport
,
Andrei Zinovyev
,
Marie Dutreix
,
Emmanuel Barillot
,
Jean-Philippe Vert
et al.
Journal articles
hal-00433577v1
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An accurate and interpretable model for siRNA efficacy prediction.
Jean-Philippe Vert
,
Nicolas Foveau
,
Christian Lajaunie
,
Yves Vandenbrouck
Journal articles
hal-00433579v1
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Efficient peptide-MHC-I binding prediction for alleles with few known binders.
Laurent Jacob
,
Jean-Philippe Vert
Journal articles
hal-00433574v1
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Graph kernels for molecular structure-activity relationship analysis with support vector machines.
Pierre Mahé
,
Nobuhisa Ueda
,
Tatsuya Akutsu
,
Jean-Luc Perret
,
Jean-Philippe Vert
et al.
Journal articles
hal-00433584v1
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A structural alignment kernel for protein structures.
Jian Qiu
,
Martial Hue
,
Asa Ben-Hur
,
Jean-Philippe Vert
,
William Stafford Noble
et al.
Journal articles
hal-00433578v1
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The pharmacophore kernel for virtual screening with support vector machines.
Pierre Mahé
,
Liva Ralaivola
,
Véronique Stoven
,
Jean-Philippe Vert
Journal articles
hal-00433580v1
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A Genomic Multiprocess Survey of Machineries that Control and Link Cell Shape, Microtubule Organization, and Cell-Cycle Progression
Veronika Graml
,
Xenia Studera
,
Jonathan L.D. Lawson
,
Anatole Chessel
,
Marco Geymonat
et al.
Journal articles
hal-01101880v1
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Impaired PRC2 activity promotes transcriptional instability and favors breast tumorigenesis
Michel Adam Wassef
,
Verónica Rodilla
,
Aurélie Teissandier
,
Bruno Zeitouni
,
Nadège Gruel
et al.
Journal articles
hal-02559123v1
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Toll-like receptor control of glucocorticoid-induced apoptosis in human plasmacytoid pre-dendritic cells (pDC).
Y. Lepelletier
,
R. Zollinger
,
C. Ghirelli
,
F. Raynaud
,
R. Hadj-Slimane
et al.
Journal articles
hal-00508701v1
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Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers
Y. Tabei
,
E. Pauwels
,
Véronique Stoven
,
K. Takemoto
,
Y. Yamanishi
et al.
Journal articles
hal-03116929v1
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Assessment of algorithms for mitosis detection in breast cancer histopathology images
Mitko Veta
,
Paul J. Van Diest
,
Stefan M. Willems
,
Haibo Wang
,
Anant Madabhushi
et al.
Journal articles
hal-01246695v1
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SV-Bay: structural variant detection in cancer genomes using a Bayesian approach with correction for GC-content and read mappability
D Iakovishina
,
Isabelle Janoueix-Lerosey
,
Emmanuel Barillot
,
Mireille Regnier
,
Valentina Boeva
et al.
2015
Preprints, Working Papers, ...
hal-01217891v1
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[Multisite validation study of questionnaire assessing out-patient satisfaction with care questionnaire in ambulatory chemotherapy or radiotherapy treatment]
Rollon Poinsot
,
A. Altmeyer
,
T. Conroy
,
A. Savignoni
,
B. Asselain
et al.
Bulletin du Cancer , 2006, 93 (3), pp.315-327
Journal articles
hal-00486947v1
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On learning matrices with orthogonal columns or disjoint supports
Kevin Vervier
,
Pierre Mahé
,
Alexandre d'Aspremont
,
Jean-Baptiste Veyrieras
,
Jean-Philippe Vert
et al.
Conference papers
hal-01101875v1
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Integration of biological data by kernels on graph nodes allows prediction of new genes involved in mitotic chromosome condensation
Jean-Karim Hériché
,
Jon G. Lees
,
Ian Morilla
,
Thomas Walter
,
Boryana Petrova
et al.
Journal articles
hal-01101877v1
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Optimizing amino acid substitution matrices with a local alignment kernel.
Hiroto Saigo
,
Jean-Philippe Vert
,
Tatsuya Akutsu
Journal articles
hal-00433581v1
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A novel representation of protein sequences for prediction of subcellular location using support vector machines.
Setsuro Matsuda
,
Jean-Philippe Vert
,
Hiroto Saigo
,
Nobuhisa Ueda
,
Hiroyuki Toh
et al.
Journal articles
hal-00433582v1
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Learning Sparse Penalties for Change-Point Detection using Max Margin Interval Regression
Guillem Rigaill
,
Toby Dylan Hocking
,
Francis Bach
,
Jean-Philippe Vert
ICML 2013 - 30 th International Conference on Machine Learning , Supported by the International Machine Learning Society (IMLS), Jun 2013, Atlanta, United States
Conference papers
hal-00824075v1
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