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Statistical methods for deciphering intra-tumor hereterogeneity : challenges and opportunities for cancer clinical management
Judith Abecassis
Bioinformatics [q-bio.QM]. Université Paris sciences et lettres, 2020. English. ⟨NNT : 2020UPSLM065⟩
Theses
tel-03228677v1
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Determining the optimal number of independent components for reproducible transcriptomic data analysis
Ulykbek Kairov
,
Laura Cantini
,
Alessandro Greco
,
Askhat Molkenov
,
Urszula Czerwinska
et al.
Journal articles
inserm-02064099v1
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Large scale evaluation of differences between network-based and pairwise sequence-alignment-based methods of dendrogram reconstruction
Daniel Gamermann
,
Arnau Montagud
,
J Alberto Conejero
,
Pedro Fernández de Córdoba
,
Javier F Urchueguía
et al.
Journal articles
inserm-02317883v1
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Validation de biomarqueurs prédictifs de la réponse au traitement : extension des courbes de prédictivités à un critère de jugement censuré
Bassirou Mboup
Theses
tel-03176621v1
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Genetic markers and phosphoprotein forms of beta-catenin pβ-Cat552 and pβ-Cat675 are prognostic biomarkers of cervical cancer
Suzy M Scholl
,
Jonas Beal
,
Leanne de Koning
,
Elodie Girard
,
Marina Popovic
et al.
Journal articles
hal-03492821v1
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Demarcation of Topologically Associating Domains Is Uncoupled from Enriched CTCF Binding in Developing Zebrafish
Yuvia A Perèz Rico
,
Emmanuel Barillot
,
Alena Shkumatava
Journal articles
hal-02872297v1
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Heterogeneity of neuroblastoma cell identity defined by transcriptional circuitries
Valentina Boeva
,
Caroline Louis-Brennetot
,
Agathe Peltier
,
Simon Durand
,
Cecile Pierre-Eugene
et al.
Journal articles
hal-01741718v1
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Rôle de la phosphatase PRL-3 et de CRMP2 dans la migration et l'invasion du mélanome uvéal
Laura Duciel
Theses
tel-02304146v1
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An autocrine ActivinB mechanism drives TGF β/Activin signaling in Group 3 medulloblastoma
Morgane Morabito
,
Magalie Larcher
,
Florence M G Cavalli
,
Chloé Foray
,
Antoine Forget
et al.
Journal articles
hal-02347105v1
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CinéBreast-factors influencing the time to first metastatic recurrence in breast cancer: Analysis of real-life data from the French ESME MBC database
P. Gougis
,
M. Carton
,
C. Tchokothe
,
M. Campone
,
F. Dalenc
et al.
Journal articles
hal-02888468v1
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BRCAness, SLFN11, and RB1 loss predict response to topoisomerase I inhibitors in triple-negative breast cancers
Florence Coussy
,
Rania El-Botty
,
Sophie Château-Joubert
,
Ahmed Dahmani
,
Elodie Montaudon
et al.
Journal articles
hal-02508765v1
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Genomic Instability Signature of Palindromic Non-Coding Somatic Mutations in Bladder Cancer
Sophie Vacher
,
Voreak Suybeng
,
Élodie Girard
,
Julien Masliah Planchon
,
Grégory Thomson
et al.
Journal articles
hal-03011747v1
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A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport
Adham Safieddine
,
Emeline Coleno
,
Soha Salloum
,
Arthur Imbert
,
Abdel-Meneem Traboulsi
et al.
Journal articles
hal-03014936v2
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Scaling ResNets in the Large-depth Regime
Pierre Marion
,
Adeline Fermanian
,
Gérard Biau
,
Jean-Philippe Vert
2022
Preprints, Working Papers, ...
hal-03697725v1
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EXPERIMENTALLY-GENERATED GROUND TRUTH FOR DETECTING CELL TYPES IN AN IMAGE-BASED IMMUNOTHERAPY SCREEN
Joseph Boyd
,
Zelia Gouveia
,
Franck Perez
,
Thomas Walter
Conference papers
hal-02976141v1
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Bioimage Informatics for Phenomics
Thomas Walter
Bioinformatics [q-bio.QM]. Sorbonne Université, 2020
Habilitation à diriger des recherches
tel-02981391v1
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Exome sequencing reveals aberrant signalling pathways as hallmark of treatment-naive anal squamous cell carcinoma
W. Cacheux
,
V. Dangles-Marie
,
E. Rouleau
,
J. Lazartigues
,
E. Girard
et al.
Journal articles
hal-01717339v1
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Evaluation of least significant changes of pulse contour analysis-derived parameters
Hugues de Courson
,
Loic Ferrer
,
Grégoire Cane
,
Eric Verchère
,
Musa Sesay
et al.
Journal articles
inserm-02467629v1
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The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
Aurélien Naldi
,
Céline Hernandez
,
Nicolas Levy
,
Gautier Stoll
,
Pedro Monteiro
et al.
Journal articles
hal-01794294v2
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kernelPSI: a Post-Selection Inference Framework for Nonlinear Variable Selection
Lotfi Slim
,
Clement Chatelain
,
Chloé-Agathe Azencott
,
Jean-Philippe Vert
36th International Conference on Machine Learning (ICML 2019), Jun 2019, Long Beach, CA, United States
Conference papers
hal-02441304v1
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CloneSig can jointly infer intra-tumor heterogeneity and mutational signature activity in bulk tumor sequencing data
Judith Abécassis
,
Fabien Reyal
,
Jean-Philippe Vert
Journal articles
hal-03510272v1
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Graph-Based Spatial Segmentation of Health-Related Areal Data
Vivien Goepp
,
Jan van de Kassteele
Journal articles
hal-03474990v1
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Exome sequencing identifies germline variants in DIS3 in familial multiple myeloma
Maroulio Pertesi
,
Maxime Vallée
,
Xiaomu Wei
,
Maria Revuelta
,
Perrine Galia
et al.
Journal articles
hal-02190723v1
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Risk-reducing salpingo-oophorectomy, natural menopause, and breast cancer risk: an international prospective cohort of BRCA1 and BRCA2 mutation carriers
Nasim Mavaddat
,
Antonis C. Antoniou
,
Thea Mooij
,
Maartje Hooning
,
Bernadette Heemskerk-Gerritsen
et al.
Journal articles
inserm-02445596v1
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A new hybrid record linkage process to make epidemiological databases interoperable: application to the GEMO and GENEPSO studies involving BRCA1 and BRCA2 mutation carriers
Yue Jiao
,
Fabienne Lesueur
,
Chloé-Agathe Azencott
,
Maïté Laurent
,
Noura Mebirouk
et al.
Journal articles
inserm-03313811v1
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National recommendations of the French Genetics and Cancer Group - Unicancer on the modalities of multi-genes panel analyses in hereditary predispositions to tumors of the digestive tract
Marion Dhooge
,
Stéphanie Baert-Desurmont
,
Carole Corsini
,
Olivier Caron
,
Nadine Andrieu
et al.
Journal articles
inserm-03182974v1
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Polygenic risk scores and breast and epithelial ovarian cancer risks for carriers of BRCA1 and BRCA2 pathogenic variants
Daniel Barnes
,
Matti Rookus
,
Lesley Mcguffog
,
Goska Leslie
,
Thea Mooij
et al.
Journal articles
inserm-03193473v1
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Qualitative dynamics semantics for SBGN process description
Adrien Rougny
,
Christine Froidevaux
,
Laurence Calzone
,
Loïc Paulevé
Journal articles
hal-01332679v1
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RNF: a general framework to evaluate NGS read mappers
Karel Brinda
,
Valentina Boeva
,
Gregory Kucherov
Journal articles
hal-01220199v2
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Xist-dependent imprinted X inactivation and the early developmental consequences of its failure
Maud Borensztein
,
Laurène Syx
,
Katia Ancelin
,
Patricia Diabangouaya
,
Christel Picard
et al.
Journal articles
hal-03021809v1
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